[Gade]

Quick question, actually when I watch a show it does not Mark it watched when it ends... I have to manually Mark it as watched!
Is this related to the skin?

It shouldn't be skin related.

Do you watch it all the way to the end or stop when the credits begin? 

Okay,

My issue of stopping the auto-play next show, it's fixed... But now in the Progress list of TV Shows it still not showing the next one to play, always show the one I just finish watching!
If I go manually in the TV Shows list it is marked as watched but not in the progress show list, still show as the next one to play... Like it is not refreshing after the show is complete (till the end)...

I guess this is skin related! Not Emby plugin, since it's marked as watched! 

Which progress list do you mean?
You have to explain in detail.

Is it the In Progress widget on the home screen?

For that one to work, you have to watch the episodes all the way to the end.
I have no issues on any platform regarding that widget.